UIMA Wrapper for the OBA Rest Service to run in Linux onli

This is the Linux app named UIMA Wrapper for the OBA Rest Service to run in Linux online whose latest release can be downloaded as oba-uima.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.

 
 

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UIMA Wrapper for the OBA Rest Service to run in Linux online



DESCRIPTION:

A wrapper for Apache UIMA (http://incubator.apache.org/uima/) that connects to the Open Biomedical Annotator (OBA) rest service from the National Center for Biomedical Ontology (http://www.bioontology.org/wiki/index.php/Annotator_User_Guide).

Features

  • Submits text to the OBA rest service and creates UIMA annotations
  • OBA rest service parameters are configurable
  • UIMA installation is not necessary as the maven build installs UIMA dependencies
  • Sample UIMA pipeline configuration is provided


Audience

Science/Research



Programming Language

Java



This is an application that can also be fetched from https://sourceforge.net/projects/oba-uima/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.



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