This is the Linux app named xPyder PyMOL Plugin whose latest release can be downloaded as xPyder-windows-installer.exe. It can be run online in the free hosting provider OnWorks for workstations.
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SCREENSHOTS
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xPyder PyMOL Plugin
DESCRIPTION
xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level.
User interface
Tk
Programming Language
Python
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/xpyder/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
