This is the Windows app named ARDEN whose latest release can be downloaded as ARDEN.zip. It can be run online in the free hosting provider OnWorks for workstations.
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ARDEN
DESCRIPTION:
We introduce ARDEN (Artificial Reference Driven Estimation of false positives in NGS data), a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC-curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation.
User interface
Command-line
Programming Language
Python
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/arden/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.