This is the Windows app named Best Reciprocal Hit from BLAST alignment whose latest release can be downloaded as ParseBLAST.exe. It can be run online in the free hosting provider OnWorks for workstations.
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Best Reciprocal Hit from BLAST alignment
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DESCRIPTION
Windows command line utility calculating protein orthologs using best reciprocal hit from BLAST alignment output
Features
- -d specifies directory with BLAST outputs. All files will be used as input for the ParseBLAST.exe
- -s Similarity cutoff (0.3 is recommended)
- -b Y/N specifies how to calculate orthologs. Y - for best reciprocal hit; N - for all possible homologs above similarity cutoff
Audience
Science/Research
User interface
Win32 (MS Windows)
Programming Language
C++
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/parseblast/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
