This is the Windows app named cash-program whose latest release can be downloaded as cash_v2.2.1.zip. It can be run online in the free hosting provider OnWorks for workstations.
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Wine is a way to run Windows software on Linux, but with no Windows required. Wine is an open-source Windows compatibility layer that can run Windows programs directly on any Linux desktop. Essentially, Wine is trying to re-implement enough of Windows from scratch so that it can run all those Windows applications without actually needing Windows.
cash-program
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DESCRIPTION
CASH (Comprehensive alternative splicing hunting) is visualized and user-friendly software that aims to self-construct AS (alternative splicing) sites and detect differential AS events between samples of RNA-Seq data. CASH consists of two major stages: SpliceCons (Splice site Construction) and SpliceDiff (differential AS detection). By comprehensively reconstructing AS sites from RNA-seq data, SpliceCons increases the recognition of AS events considerably and subsequently, SpliceDiff uses two combined statistical methods to improve the detection of differential AS events.Different from our previous ASD program, we developed a new module named SpliceCons implemented into CASH and also refined the scripts to detect differential AS events. We recommend using CASH, which now replaces the original ASD version.
You can download CASH from sourceforge or from the website below. Manual is also on the website below.
This is an application that can also be fetched from https://sourceforge.net/projects/cash-program/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
