This is the Windows app named DEBay to run in Windows online over Linux online whose latest release can be downloaded as Results.rar. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named DEBay to run in Windows online over Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start any OS OnWorks online emulator from this website, but better Windows online emulator.
- 5. From the OnWorks Windows OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application and install it.
- 7. Download Wine from your Linux distributions software repositories. Once installed, you can then double-click the app to run them with Wine. You can also try PlayOnLinux, a fancy interface over Wine that will help you install popular Windows programs and games.
Wine is a way to run Windows software on Linux, but with no Windows required. Wine is an open-source Windows compatibility layer that can run Windows programs directly on any Linux desktop. Essentially, Wine is trying to re-implement enough of Windows from scratch so that it can run all those Windows applications without actually needing Windows.
SCREENSHOTS:
DEBay to run in Windows online over Linux online
DESCRIPTION:
DEBay: Deconvolution of Ensemble through Bayes-approachDEBay estimates cell type-specific gene expression by deconvolution of quantitative PCR data of a mixed population. It will be useful in experiments where the segregation of different cell types in a sample is arduous, but the proportion of different cell types in the sample can be measured. DEBay uses the population distribution data and the qPCR data to calculate the relative expression of the target gene in different cell types in the sample.
Installation instructions and the user manual of DEBay: https://sourceforge.net/projects/debay/files/UserManual.pdf
Sample test data set: https://sourceforge.net/projects/debay/files/Test_data/
Citation Information: Vimalathithan Devaraj, and Biplab Bose. DEBay: a computational tool for deconvolution of quantitative PCR data for estimation of cell type-specifc gene expression in a mixed population. bioRxiv 2020 doi: https://doi.org/10.1101/2020.04.10.035642
Features
- Deconvolutes cell-type-specific gene expression from quantitative PCR data
- Deconvolutes both time-dependent and -independent gene expression data
- Uses the Bayesian method of parameter estimation
- Gives the statistics of the estimated parameters
Audience
Science/Research, Education, Engineering
User interface
Project is a user interface (UI) system
Programming Language
Python
This is an application that can also be fetched from https://sourceforge.net/projects/debay/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.