This is the Windows app named MANTI whose latest release can be downloaded as maize_summary.zip. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named MANTI with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start any OS OnWorks online emulator from this website, but better Windows online emulator.
- 5. From the OnWorks Windows OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application and install it.
- 7. Download Wine from your Linux distributions software repositories. Once installed, you can then double-click the app to run them with Wine. You can also try PlayOnLinux, a fancy interface over Wine that will help you install popular Windows programs and games.
Wine is a way to run Windows software on Linux, but with no Windows required. Wine is an open-source Windows compatibility layer that can run Windows programs directly on any Linux desktop. Essentially, Wine is trying to re-implement enough of Windows from scratch so that it can run all those Windows applications without actually needing Windows.
SCREENSHOTS:
MANTI
DESCRIPTION:
MANTI is a one-stop shop N-termini annotation & evaluation solution. MANTI was previously (un)known as muda.pl ahead of v3.7, the project was renamed to MANTI.pl with v3.7 on 2019-06-24.
It congregates information from 4 (or optionally 5) different MaxQuant output files into a master file suitable explicitly for protein neo-termini analyses. The central anchor for the data congregation is the modificationSpecificPeptides.txt file - additional data is inferred from different other source files from the MaxQuant txt folder. Maybe also useful for normal proteomics purposes but this script is heavily optimized for protein neo-termini identification and validation. A graphical interface is available as Yoğurtlu_MANTI (a Perl/Tk script) + execut. application versions for Win10 without the need to have Perl installed locally.
For a very detailed explanation of script parameters and the evaluation strategy, please consult the extensive manual PDF files accompanying each release.
Features
- MaxQuant N-termini evaluation
- Protein-Termini evaluation & validation
- (UniProt) data annotation & assembly
- Limma, LOCALIZER, TargetP2.0 & TopFINDer integration
- Re-mapping of identified Termini to correct Isoforms
- Plenty of visualization options with supplied R scripts
Audience
Science/Research
User interface
Command-line
Programming Language
Perl
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/manti/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.