This is the Windows app named MetaMIS whose latest release can be downloaded as MetaMIS_v1.02_Mac.zip. It can be run online in the free hosting provider OnWorks for workstations.
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SCREENSHOTS
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MetaMIS
DESCRIPTION
MetaMIS is the first tool to automatically infer the microbial interactions of microbial community profile in the field of metagenomics. The most distinguished feature of MetaMIS is its ability to retain maximum population of rare species in an ecological interactive network. MetaMIS provides a user-friendly interactive stand-alone graphical interface for scientists without programming skills to investigate the interactions among microorganisms.
2017.03.09 MetaMIS_v1.02:
- Create an option to export consensus table.
- Decimal time is allowed.
2016.12.16 MetaMIS_v1.01:
- fix the memory-out problem for larger abundance table (>500 OTUs).
- add three items to constrain the total number of running interaction networks
2016.11.17 MetaMIS_v1
Features
- Metagenomics
- time series
- Lotka-Volterra model
- microbial interaction
- 16S rRNA
- mutualism
- competition
- parasitism
- predation
- commensalism
- amensalism
- MetaMIS
Programming Language
MATLAB
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/metamis/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
