This is the Windows app named MS2Analyzer whose latest release can be downloaded as MS2Analyzer.zip. It can be run online in the free hosting provider OnWorks for workstations.
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SCREENSHOTS:
MS2Analyzer
DESCRIPTION:
A java software to search neutral loss, precursor ion, product ion and m/z difference in MSMS spectra. The input file can be MGF/MSP file and the output is an Excel 2003 spreadsheet that contains all the search results. Users can write their own query text file based on their study purposes.This is an application that can also be fetched from https://sourceforge.net/projects/ms2analyzer/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.