This is the Windows app named Pysimony to run in Windows online over Linux online whose latest release can be downloaded as Pysimony.py. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named Pysimony to run in Windows online over Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start any OS OnWorks online emulator from this website, but better Windows online emulator.
- 5. From the OnWorks Windows OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application and install it.
- 7. Download Wine from your Linux distributions software repositories. Once installed, you can then double-click the app to run them with Wine. You can also try PlayOnLinux, a fancy interface over Wine that will help you install popular Windows programs and games.
Wine is a way to run Windows software on Linux, but with no Windows required. Wine is an open-source Windows compatibility layer that can run Windows programs directly on any Linux desktop. Essentially, Wine is trying to re-implement enough of Windows from scratch so that it can run all those Windows applications without actually needing Windows.
Pysimony to run in Windows online over Linux online
Ad
DESCRIPTION
UPDATE: After some bug fixes, I've ditched Pysimony for Javamony: https://sourceforge.net/projects/javamony/Given Python's beauty, I know that someday I will have to finish Pysimony.
A student's first attempt at a phylogenetic inference program, written in the simplistic yet elegant Python.
Pysimony reads a FASTA file (only ATGC accepted) specified as its only argument. Basic testing has shown that it is slow, inaccurate and most definitely inefficient. An unlikely-to-be-the-most-parsimonious tree is printed upon completion in basic Newick tree format.
As all parts of the program are the original work of a beginner programmer, this may represent one of the worst approaches to solving the phylogenetic problem. I have clearly avoided object-oriented programming.
Nevertheless, I distribute this imagining it might someday be slightly educational or at least provide a laugh at the pathetic attempt it makes to reinvent the wheel
Features
- Flawed parsimony calculator
- Reads FASTA files (only ATGC)
- Outputs tree in Newick format
- Simple, single mode
Audience
Science/Research, Education
User interface
Command-line
Programming Language
Python
This is an application that can also be fetched from https://sourceforge.net/projects/pysimony/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
