This is the Windows app named rxncon whose latest release can be downloaded as rxncon_src.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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rxncon
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DESCRIPTION
The complexity of cellular networks is an outstanding challenge for documentation, visualisation and mathematical modelling. In this project, we develop a new way to describe these networks that minimises the combinatorial complexity and allows an automatic visualisation and export of mathematical (ODE/rulebased) models.
Features
- Automatic visualiztion with Cytoscape.
- Automatic generation of rule based models for BioNetGen.
- Storage of biological facts that can be used for modelling.
Audience
Science/Research, Advanced End Users
Programming Language
Python, JavaScript
Database Environment
SQL-based
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/yeastmap/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
