This is the Linux app named MPIGeneNet whose latest release can be downloaded as MPIGeneNet_rel1.6.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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MPIGeneNet
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DESCRIPTION
MPIGeneNet is a parallel tool to construct gene co-expression networks using Pearson’s correlation and Random Matrix Theory (RMT). This tool takes as input a matrix with the expression values (a float value) for different genes observed from several samples. It is a parallelization of RMTGenNet tool (https://github.com/spficklin/RMTGeneNet). MPIGeneNet integrates the whole procedure of creating the in one program, which makes the tool easier to work with (the users only have to launch the application once) and avoids writing/reading from intermediate files among the modules.
Audience
Information Technology, Healthcare Industry, Science/Research
User interface
Console/Terminal, Command-line
Programming Language
C++
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/mpigenenet/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
