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gt-mkfeatureindex - Online in the Cloud

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This is the command gt-mkfeatureindex that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


gt-mkfeatureindex - Creates a new FeatureIndex from annotation data.

SYNOPSIS


gt mkfeatureindex [option ...] <input filename(s)>

DESCRIPTION


-force [yes|no]
force writing to output file (default: no)

-backend [...]
database backend to use choose from [sqlite] (default: sqlite)

-input [...]
input data format choose from gff|bed|gtf (default: gff)

-filename [string]
filename for feature database (sqlite backend only) (default: undefined)

-v [yes|no]
be verbose (default: no)

-help
display help and exit

-version
display version information and exit

REPORTING BUGS


Report bugs to <[email protected]>.

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