This is the command kmc_tools-histogram that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
kmc_tools-histogram - produce histogram of k-mer occurrences
SYNOPSIS
kmc_tools histogram <inputdb> [input_params] <output>
DESCRIPTION
This command produces a histogram of k-mer occurrences.
OPTIONS
For each input there are additional parameters:
-ci<value>
exclude k-mers occurring less than <value> times
-cx<value>
exclude k-mers occurring more of than <value> times
EXAMPLE
kmc_tools histogram wy_kmc2 -ci3 -cx1000 histo.txt
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