EnglishFrenchSpanish

OnWorks favicon

High-Throughput Tabular Data Processor to run in Linux onl

Free download High-Throughput Tabular Data Processor to run in Linux online Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named High-Throughput Tabular Data Processor to run in Linux online whose latest release can be downloaded as HTDP.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named High-Throughput Tabular Data Processor to run in Linux online with OnWorks for free.

Follow these instructions in order to run this app:

- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

SCREENSHOTS

Ad


High-Throughput Tabular Data Processor to run in Linux online


DESCRIPTION

HIGH-THROUGHPUT TABULAR DATA PROCESSOR (HTDP) is Java application that is intended to facilitate data exploration and reduction tasks in large text files resulting from high throughput technologies, e.g. massively parallel sequencing or microarrays. The software has been optimized for microarray and deep parallel sequencing data, however it can accept any character delimited tabular data sets. HTDP can also import, process and convert Variant Call Format (VCF) files ver. 4.0, 4.1 and 4.2 (http://samtools.github.io/hts-specs/VCFv4.2.pdf).
HTDP provides quick filtering functionality and can process data consisting of single or multiple input files.

Citation: Madanecki P, Bałut M, Buckley PG, Ochocka JR, Bartoszewski R, Crossman DK, et al. (2018) High-Throughput Tabular Data Processor – Platform independent graphical tool for processing large data sets. PLoS ONE 13(2): e0192858. https://doi.org/10.1371/journal.pone.0192858

Features

  • works on any character-delimited column data (e.g. BED, GFF, GTF, WIG, VCF)
  • merge tabular data files vertically and horizontally
  • merge any tabular data files using genome location or common column(s)
  • unlimited filtering and data reduction capabilities
  • different files with regards to format and content can be analyzed at the same time


Programming Language

Java



This is an application that can also be fetched from https://sourceforge.net/projects/htdp/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


Free Servers & Workstations

Download Windows & Linux apps

  • 1
    turkdevops
    turkdevops
    TurkDevOps a�?k kaynak yaz?l?m
    geli?tirici topluluklar? DevTurks-Team
    Taraf?ndan desteklenmektedir..
    Features:https://github.com/turkdevopshttps://turkdevops.g...
    Download turkdevops
  • 2
    asammdf
    asammdf
    *asammdf* is a fast Python parser and
    editor for ASAM (Associtation for
    Standardisation of Automation and
    Measuring Systems) MDF / MF4
    (Measurement Data Format...
    Download asammdf
  • 3
    LAME (Lame Aint an MP3 Encoder)
    LAME (Lame Aint an MP3 Encoder)
    LAME is an educational tool to be used
    for learning about MP3 encoding. The
    goal of the LAME project is to improve
    the psycho acoustics, quality and speed
    of MP...
    Download LAME (Lame Aint an MP3 Encoder)
  • 4
    wxPython
    wxPython
    A set of Python extension modules that
    wrap the cross-platform GUI classes from
    wxWidgets.. Audience: Developers. User
    interface: X Window System (X11), Win32 ...
    Download wxPython
  • 5
    packfilemanager
    packfilemanager
    This is the Total War pack file manager
    project, starting from version 1.7. A
    short introduction into Warscape
    modding: ...
    Download packfilemanager
  • 6
    IPerf2
    IPerf2
    A network traffic tool for measuring
    TCP and UDP performance with metrics
    around both throughput and latency. The
    goals include maintaining an active
    iperf cod...
    Download IPerf2
  • More »

Linux commands

Ad